Cherry SNP DataBase
SNP information
| Name |
Pav_sc0000013.1_109444R |
| Chr |
PAV_r1.0chr6 |
| Pos (Chr) |
8960353 |
| PAV_r1.0 |
Pav_sc0000013.1 |
| Pos (PAV_r1.0) |
109444 |
| REF |
A |
| ALT |
G |
| SSR motif |
|
| Gene |
Name |
|
| Annotation |
|
| snpEff |
Effect |
|
| Impact |
|
| Codon |
|
| Amino Acid |
|
| PCR |
Forward primer |
GATTGCAGGCATCAAGAACA |
| Reverse primer |
CCCGGATTATGCCAATCTTA |
| Product size |
259 |
| Enzymes for CAPS |
BamHI | MboI |
| Exp. fragment size (REF) |
113,146 | 113,146 |
| Exp. fragment size (ALT) |
259 | 259 |
| References |
|
Germplasm List
| Benikirari |
Benisayaka |
Benishuho |
Benitemari |
Beniyutaka |
Nanyo |
Satonishiki |
REF/ALT |
REF/ALT |
REF/REF |
REF/REF |
ALT/ALT |
REF/REF |
REF/ALT |
| Top |