Cherry SNP DataBase

SNP information

Name Pav_sc0000036.1_19500M
Chr PAV_r1.0chr7
Pos (Chr) 10940691
PAV_r1.0 Pav_sc0000036.1
Pos (PAV_r1.0) 19500
REF A
ALT C
SSR motif
Gene Name Pav_sc0000036.1_g040.1.br
Annotation non-ltr retroelement reverse transcriptase
snpEff Effect missense_variant
Impact MODERATE
Codon c.2224A>C
Amino Acid p.Ile742Leu
PCR Forward primer GCAGGTGTATCGTGGAAGGT
Reverse primer AAGAAGGCCGAAAAGAGGAC
Product size 203
Enzymes for CAPS
Exp. fragment size (REF)
Exp. fragment size (ALT)
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
REF/ALT REF/ALT REF/ALT REF/ALT REF/ALT REF/ALT REF/ALT


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