Cherry SNP DataBase

SNP information

Name Pav_sc0000037.1_84932K
Chr PAV_r1.0chr4
Pos (Chr) 3491975
PAV_r1.0 Pav_sc0000037.1
Pos (PAV_r1.0) 84932
REF T
ALT G
SSR motif
Gene Name Pav_sc0000037.1_g160.1.mk
Annotation PREDICTED: protein CHUP1, chloroplastic
snpEff Effect splice_region_variant&intron_variant
Impact LOW
Codon c.1698+8T>G
Amino Acid
PCR Forward primer ATAGATCAAGCTGGCATCCG
Reverse primer CTCATCGTTTCTGCATCGAA
Product size 260
Enzymes for CAPS
Exp. fragment size (REF)
Exp. fragment size (ALT)
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
REF/ALT REF/REF REF/ALT ALT/ALT REF/ALT REF/REF REF/ALT


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