Cherry SNP DataBase

SNP information

Name Pav_sc0000042.1_283167Y
Chr PAV_r1.0chr5
Pos (Chr) 11213507
PAV_r1.0 Pav_sc0000042.1
Pos (PAV_r1.0) 283167
REF T
ALT C
SSR motif
Gene Name Pav_sc0000042.1_g490.1.mk
Annotation PREDICTED: ADP-ribosylation factor GTPase-activating protein AGD3
snpEff Effect intron_variant
Impact MODIFIER
Codon c.1836+47A>G
Amino Acid
PCR Forward primer CAGAAGTTTCCCATCCTCCA
Reverse primer AAAAATGAACGAAGTTGCGG
Product size 328
Enzymes for CAPS
Exp. fragment size (REF)
Exp. fragment size (ALT)
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
-/- REF/ALT ALT/ALT REF/ALT ALT/ALT -/- REF/ALT


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