Cherry SNP DataBase

SNP information

Name Pav_sc0000086.1_80778R
Chr PAV_r1.0chr4
Pos (Chr) 7973844
PAV_r1.0 Pav_sc0000086.1
Pos (PAV_r1.0) 80778
REF A
ALT G
SSR motif
Gene Name Pav_sc0000086.1_g160.1.mk
Annotation PREDICTED: pentatricopeptide repeat-containing protein At4g19890
snpEff Effect synonymous_variant
Impact LOW
Codon c.1923A>G
Amino Acid p.Thr641Thr
PCR Forward primer ATGATGGACAAAGGGCTGTC
Reverse primer TCAGCTGCTAGCCAATTCCT
Product size 334
Enzymes for CAPS
Exp. fragment size (REF)
Exp. fragment size (ALT)
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
REF/REF ALT/ALT REF/ALT REF/REF REF/REF REF/ALT REF/ALT


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