Cherry SNP DataBase

SNP information

Name Pav_sc0000096.1_351730W
Chr PAV_r1.0chr7
Pos (Chr) 3846290
PAV_r1.0 Pav_sc0000096.1
Pos (PAV_r1.0) 351730
REF A
ALT T
SSR motif
Gene Name Pav_sc0000096.1_g580.1.mk
Annotation PREDICTED: uncharacterized protein At2g41620-like
snpEff Effect 5_prime_UTR_premature_start_codon_gain_variant
Impact LOW
Codon c.-86A>T
Amino Acid
PCR Forward primer TCACCTTTTAACGCCTTCAACT
Reverse primer CTGTAGAGGAGGGAACTGCG
Product size 263
Enzymes for CAPS PstI
Exp. fragment size (REF) 66,10,187
Exp. fragment size (ALT) 66,197
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
ALT/ALT REF/REF REF/REF -/- -/- ALT/ALT REF/ALT


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