Cherry SNP DataBase

SNP information

Name Pav_sc0000096.1_94238W
Chr PAV_r1.0chr7
Pos (Chr) 3588798
PAV_r1.0 Pav_sc0000096.1
Pos (PAV_r1.0) 94238
REF A
ALT T
SSR motif
Gene Name Pav_sc0000096.1_g170.1.mk
Annotation Heat shock protein DnaJ with tetratricopeptide repeat, putative isoform 1
snpEff Effect missense_variant
Impact MODERATE
Codon c.3004A>T
Amino Acid p.Asn1002Tyr
PCR Forward primer TGGTTTCTGTCAGGGGAAAC
Reverse primer TGGGCTCAAATGGAATACAA
Product size 312
Enzymes for CAPS
Exp. fragment size (REF)
Exp. fragment size (ALT)
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
REF/REF REF/ALT REF/ALT REF/ALT REF/REF REF/REF REF/REF


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