Cherry SNP DataBase

SNP information

Name Pav_sc0000099.1_46828Y
Chr PAV_r1.0chr7
Pos (Chr) 13650611
PAV_r1.0 Pav_sc0000099.1
Pos (PAV_r1.0) 46828
REF C
ALT T
SSR motif
Gene Name Pav_sc0000099.1_g100.1.mk
Annotation PREDICTED: putative B3 domain-containing protein At4g03170
snpEff Effect intron_variant
Impact MODIFIER
Codon c.462+28C>T
Amino Acid
PCR Forward primer GCACGTCTGGCTATTGTTGA
Reverse primer AGCTTCTTTTAAGCCAGCCC
Product size 270
Enzymes for CAPS MspI
Exp. fragment size (REF) 196,74
Exp. fragment size (ALT) 270
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
REF/ALT REF/REF REF/REF REF/REF ALT/ALT REF/ALT REF/REF


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