Cherry SNP DataBase

SNP information

Name Pav_sc0000131.1_149932K
Chr PAV_r1.0chr1
Pos (Chr) 30280237
PAV_r1.0 Pav_sc0000131.1
Pos (PAV_r1.0) 149932
REF G
ALT T
SSR motif
Gene Name Pav_sc0000131.1_g250.1.mk
Annotation PREDICTED: serine/threonine-protein kinase At5g01020
snpEff Effect intron_variant
Impact MODIFIER
Codon c.412-83G>T
Amino Acid
PCR Forward primer TTGTGAAGATGAGCACAGGC
Reverse primer ATGACAGGCTTATGATCGGC
Product size 306
Enzymes for CAPS AluI | HaeIII
Exp. fragment size (REF) 51,79,176 | 125,142,39
Exp. fragment size (ALT) 51,71,8,176 | 267,39
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
ALT/ALT ALT/ALT ALT/ALT REF/ALT REF/ALT REF/ALT REF/ALT


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