Cherry SNP DataBase

SNP information

Name Pav_sc0000148.1_82129Y
Chr PAV_r1.0chr2
Pos (Chr) 4530290
PAV_r1.0 Pav_sc0000148.1
Pos (PAV_r1.0) 82129
REF T
ALT C
SSR motif
Gene Name Pav_sc0000148.1_g180.1.mk
Annotation hypothetical protein PRUPE_ppa015501mg
snpEff Effect synonymous_variant
Impact LOW
Codon c.669A>G
Amino Acid p.Ser223Ser
PCR Forward primer TGCACTGACAAGTGGGGTAA
Reverse primer ATCAAAGGATTGAGGATGCG
Product size 285
Enzymes for CAPS EcoRV
Exp. fragment size (REF) 285
Exp. fragment size (ALT) 139,146
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
REF/ALT REF/REF REF/REF REF/REF REF/ALT REF/ALT REF/REF


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