Cherry SNP DataBase

SNP information

Name Pav_sc0000164.1_90633M
Chr PAV_r1.0chr8
Pos (Chr) 17231623
PAV_r1.0 Pav_sc0000164.1
Pos (PAV_r1.0) 90633
REF A
ALT C
SSR motif
Gene Name Pav_sc0000164.1_g170.1.mk
Annotation PREDICTED: protein LOW PSII ACCUMULATION 1, chloroplastic
snpEff Effect intron_variant
Impact MODIFIER
Codon c.879-37T>G
Amino Acid
PCR Forward primer TGCAACAAAAGCATTCCAAG
Reverse primer ACAAGTGCCTTATGCTCGCT
Product size 299
Enzymes for CAPS
Exp. fragment size (REF)
Exp. fragment size (ALT)
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
REF/REF REF/ALT REF/ALT REF/ALT REF/REF REF/ALT REF/ALT


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