Cherry SNP DataBase

SNP information

Name Pav_sc0000168.1_53452W
Chr PAV_r1.0chr6
Pos (Chr) 10025406
PAV_r1.0 Pav_sc0000168.1
Pos (PAV_r1.0) 53452
REF T
ALT A
SSR motif
Gene Name Pav_sc0000168.1_g110.1.mk
Annotation PREDICTED: NAC domain-containing protein 90
snpEff Effect 3_prime_UTR_variant
Impact MODIFIER
Codon c.*178A>T
Amino Acid
PCR Forward primer AAGTCAACAGGCCATGGTTC
Reverse primer CCATTTGAGGAAGCAAGCAT
Product size 263
Enzymes for CAPS DraI
Exp. fragment size (REF) 62,201
Exp. fragment size (ALT) 62,65,136
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
REF/ALT REF/ALT REF/ALT ALT/ALT REF/ALT ALT/ALT REF/ALT


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