Cherry SNP DataBase

SNP information

Name Pav_sc0000174.1_173313M
Chr PAV_r1.0chr2
Pos (Chr) 8505850
PAV_r1.0 Pav_sc0000174.1
Pos (PAV_r1.0) 173313
REF C
ALT A
SSR motif
Gene Name Pav_sc0000174.1_g270.1.mk
Annotation PREDICTED: putative E3 ubiquitin-protein ligase LIN-1
snpEff Effect missense_variant
Impact MODERATE
Codon c.299C>A
Amino Acid p.Ser100Tyr
PCR Forward primer CGTCTCAGATGCACCTTCAA
Reverse primer ATGAGCAGCACACCAAACAG
Product size 244
Enzymes for CAPS
Exp. fragment size (REF)
Exp. fragment size (ALT)
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
REF/REF REF/ALT REF/ALT REF/ALT REF/REF REF/REF REF/REF


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