Cherry SNP DataBase

SNP information

Name Pav_sc0000183.1_189713Y
Chr PAV_r1.0chr3
Pos (Chr) 6058167
PAV_r1.0 Pav_sc0000183.1
Pos (PAV_r1.0) 189713
REF C
ALT T
SSR motif
Gene Name Pav_sc0000183.1_g470.1.mk
Annotation PREDICTED: aspartate, glycine, lysine and serine-rich protein-like
snpEff Effect intron_variant
Impact MODIFIER
Codon c.803+161C>T
Amino Acid
PCR Forward primer CCCCTGACGACTGGTAAGAA
Reverse primer GAAACCCCGAGAGATATTCCA
Product size 304
Enzymes for CAPS HaeIII
Exp. fragment size (REF) 172,132
Exp. fragment size (ALT) 304
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
REF/ALT REF/REF REF/REF REF/ALT REF/REF REF/REF REF/REF


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