Cherry SNP DataBase

SNP information

Name Pav_sc0000195.1_239409W
Chr PAV_r1.0chr1
Pos (Chr) 35740421
PAV_r1.0 Pav_sc0000195.1
Pos (PAV_r1.0) 239409
REF T
ALT A
SSR motif
Gene Name Pav_sc0000195.1_g320.1.mk
Annotation PREDICTED: pentatricopeptide repeat-containing protein At1g77405
snpEff Effect missense_variant
Impact MODERATE
Codon c.1186T>A
Amino Acid p.Tyr396Asn
PCR Forward primer AGGGTTATAGAGGCTCGGGA
Reverse primer TCACAGCGTCAAGTTTCCAC
Product size 242
Enzymes for CAPS
Exp. fragment size (REF)
Exp. fragment size (ALT)
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
REF/REF REF/REF REF/REF REF/REF REF/REF REF/ALT REF/REF


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