Cherry SNP DataBase

SNP information

Name Pav_sc0000203.1_33794R
Chr PAV_r1.0chr6
Pos (Chr) 16738925
PAV_r1.0 Pav_sc0000203.1
Pos (PAV_r1.0) 33794
REF A
ALT G
SSR motif
Gene Name Pav_sc0000203.1_g080.1.mk
Annotation PREDICTED: LOW QUALITY PROTEIN: protein IQ-DOMAIN 1
snpEff Effect synonymous_variant
Impact LOW
Codon c.1014A>G
Amino Acid p.Ala338Ala
PCR Forward primer CTCAACCGGAAGAGGTGAAA
Reverse primer TGAATCTTGATTGCTGCCAC
Product size 208
Enzymes for CAPS HhaI
Exp. fragment size (REF) 208
Exp. fragment size (ALT) 134,74
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
ALT/ALT REF/ALT REF/ALT REF/ALT REF/ALT ALT/ALT REF/ALT


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