Cherry SNP DataBase

SNP information

Name Pav_sc0000212.1_557653M
Chr PAV_r1.0chr7
Pos (Chr) 16889916
PAV_r1.0 Pav_sc0000212.1
Pos (PAV_r1.0) 557653
REF A
ALT C
SSR motif
Gene Name Pav_sc0000212.1_g1040.1.mk
Annotation PREDICTED: probable glutamate carboxypeptidase 2
snpEff Effect intron_variant
Impact MODIFIER
Codon c.1267-92A>C
Amino Acid
PCR Forward primer GCAACTCCACAGCTTGATGA
Reverse primer ATCTGGGTCTTGAACCTTCG
Product size 244
Enzymes for CAPS MboI
Exp. fragment size (REF) 113,23,108
Exp. fragment size (ALT) 113,131
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
REF/ALT REF/REF REF/REF REF/REF REF/REF REF/REF REF/REF


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