Cherry SNP DataBase

SNP information

Name Pav_sc0000257.1_633836Y
Chr PAV_r1.0chr1
Pos (Chr) 37780687
PAV_r1.0 Pav_sc0000257.1
Pos (PAV_r1.0) 633836
REF T
ALT C
SSR motif
Gene Name Pav_sc0000257.1_g1020.1.mk
Annotation PREDICTED: rho GTPase-activating protein REN1
snpEff Effect missense_variant
Impact MODERATE
Codon c.1025T>C
Amino Acid p.Val342Ala
PCR Forward primer ATGATCGCGGTGGTAGAATC
Reverse primer TGGACGGAGAAGTAAGGGTG
Product size 325
Enzymes for CAPS HhaI
Exp. fragment size (REF) 325
Exp. fragment size (ALT) 256,69
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
REF/ALT REF/ALT REF/ALT REF/ALT ALT/ALT REF/ALT REF/ALT


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