Cherry SNP DataBase

SNP information

Name Pav_sc0000296.1_86562K
Chr PAV_r1.0chr4
Pos (Chr) 16641356
PAV_r1.0 Pav_sc0000296.1
Pos (PAV_r1.0) 86562
REF G
ALT T
SSR motif
Gene Name Pav_sc0000296.1_g130.1.br
Annotation PREDICTED: indole-3-acetate O-methyltransferase 1-like
snpEff Effect intron_variant
Impact MODIFIER
Codon c.528+320C>A
Amino Acid
PCR Forward primer GATGGGCTGCAAATAAGGAA
Reverse primer AATTTTGAAGGGGATGGACC
Product size 226
Enzymes for CAPS AfaI
Exp. fragment size (REF) 126,100
Exp. fragment size (ALT) 226
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
REF/ALT REF/ALT REF/REF REF/REF REF/ALT REF/ALT REF/ALT


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