Cherry SNP DataBase

SNP information

Name Pav_sc0000299.1_110882K
Chr PAV_r1.0chr3
Pos (Chr) 19761661
PAV_r1.0 Pav_sc0000299.1
Pos (PAV_r1.0) 110882
REF G
ALT T
SSR motif
Gene Name Pav_sc0000299.1_g230.1.mk
Annotation H(+)-transporting atpase plant/fungi plasma membrane type, putative
snpEff Effect intron_variant
Impact MODIFIER
Codon c.184-16C>A
Amino Acid
PCR Forward primer TTCCATCACCCATGACAGAG
Reverse primer TCTGCCGCCTTTTCTTTTTA
Product size 234
Enzymes for CAPS AfaI
Exp. fragment size (REF) 77,157
Exp. fragment size (ALT) 234
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
ALT/ALT ALT/ALT REF/ALT ALT/ALT ALT/ALT REF/ALT REF/ALT


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