Cherry SNP DataBase

SNP information

Name Pav_sc0000323.1_132444Y
Chr PAV_r1.0chr6
Pos (Chr) 5726654
PAV_r1.0 Pav_sc0000323.1
Pos (PAV_r1.0) 132444
REF C
ALT T
SSR motif
Gene Name Pav_sc0000323.1_g260.1.mk
Annotation PREDICTED: LOW QUALITY PROTEIN: phototropin-1
snpEff Effect intron_variant
Impact MODIFIER
Codon c.1622-47G>A
Amino Acid
PCR Forward primer TAGGCTGCAGATGAAACACG
Reverse primer TCCTGCAAGGACCTGAGACT
Product size 305
Enzymes for CAPS
Exp. fragment size (REF)
Exp. fragment size (ALT)
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
REF/ALT REF/ALT REF/REF REF/ALT ALT/ALT REF/ALT REF/ALT


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