Cherry SNP DataBase

SNP information

Name Pav_sc0000354.1_256192R
Chr PAV_r1.0chr1
Pos (Chr) 20407402
PAV_r1.0 Pav_sc0000354.1
Pos (PAV_r1.0) 256192
REF A
ALT G
SSR motif
Gene Name Pav_sc0000354.1_g410.1.mk
Annotation PREDICTED: pre-mRNA-processing factor 17 isoform X2
snpEff Effect intron_variant
Impact MODIFIER
Codon c.3737+83T>C
Amino Acid
PCR Forward primer GTTTCCATCAGCCTGCAAGT
Reverse primer GAGCATGCGGTATTGGTTCT
Product size 276
Enzymes for CAPS AfaI
Exp. fragment size (REF) 156,120
Exp. fragment size (ALT) 276
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
REF/REF REF/ALT REF/REF REF/REF REF/REF REF/REF REF/REF


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