Cherry SNP DataBase

SNP information

Name Pav_sc0000358.1_140275W
Chr PAV_r1.0chr5
Pos (Chr) 14921189
PAV_r1.0 Pav_sc0000358.1
Pos (PAV_r1.0) 140275
REF A
ALT T
SSR motif
Gene Name Pav_sc0000358.1_g300.1.mk
Annotation PREDICTED: uncharacterized protein LOC103338568
snpEff Effect synonymous_variant
Impact LOW
Codon c.528A>T
Amino Acid p.Ala176Ala
PCR Forward primer TCGCTGTCGAGCATAGAGAA
Reverse primer CCACTGAAAGCAAAGCAACA
Product size 208
Enzymes for CAPS AluI
Exp. fragment size (REF) 107,77,24
Exp. fragment size (ALT) 107,5,72,24
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
REF/ALT ALT/ALT ALT/ALT ALT/ALT ALT/ALT ALT/ALT REF/ALT


| Top |