Cherry SNP DataBase

SNP information

Name Pav_sc0000398.1_89858Y
Chr PAV_r1.0chr4
Pos (Chr) 15222470
PAV_r1.0 Pav_sc0000398.1
Pos (PAV_r1.0) 89858
REF C
ALT T
SSR motif
Gene Name Pav_sc0000398.1_g200.1.mk
Annotation PREDICTED: psbQ-like protein 2, chloroplastic
snpEff Effect synonymous_variant
Impact LOW
Codon c.549C>T
Amino Acid p.Phe183Phe
PCR Forward primer GCATTTGATCTCCTGGCAAT
Reverse primer TAGGTTGCGTTGCTTCACAG
Product size 293
Enzymes for CAPS
Exp. fragment size (REF)
Exp. fragment size (ALT)
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
REF/REF REF/REF REF/REF REF/REF REF/ALT REF/REF REF/REF


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