Cherry SNP DataBase
SNP information
| Name |
Pav_sc0000410.1_76958K |
| Chr |
PAV_r1.0chr1 |
| Pos (Chr) |
26661844 |
| PAV_r1.0 |
Pav_sc0000410.1 |
| Pos (PAV_r1.0) |
76958 |
| REF |
G |
| ALT |
T |
| SSR motif |
|
| Gene |
Name |
|
| Annotation |
|
| snpEff |
Effect |
intergenic_region |
| Impact |
MODIFIER |
| Codon |
n.76958G>T |
| Amino Acid |
|
| PCR |
Forward primer |
TGAAATCCTGATGCATGGAA |
| Reverse primer |
TGGTTGGAACTTGGTTGGTT |
| Product size |
345 |
| Enzymes for CAPS |
AfaI |
| Exp. fragment size (REF) |
56,227,62 |
| Exp. fragment size (ALT) |
56,191,36,62 |
| References |
|
Germplasm List
| Benikirari |
Benisayaka |
Benishuho |
Benitemari |
Beniyutaka |
Nanyo |
Satonishiki |
REF/ALT |
ALT/ALT |
REF/ALT |
REF/ALT |
REF/REF |
REF/REF |
REF/ALT |
| Top |