Cherry SNP DataBase

SNP information

Name Pav_sc0000474.1_97320Y
Chr PAV_r1.0chr5
Pos (Chr) 1461937
PAV_r1.0 Pav_sc0000474.1
Pos (PAV_r1.0) 97320
REF T
ALT C
SSR motif
Gene Name Pav_sc0000474.1_g180.1.mk
Annotation PREDICTED: lysine-specific demethylase JMJ25-like
snpEff Effect intron_variant
Impact MODIFIER
Codon c.1160+21T>C
Amino Acid
PCR Forward primer CATGAAAGATGTGACCACCG
Reverse primer CGACAACAGTTGAGGCAAAG
Product size 335
Enzymes for CAPS MspI
Exp. fragment size (REF) 335
Exp. fragment size (ALT) 177,158
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
REF/ALT REF/ALT REF/REF REF/ALT REF/REF ALT/ALT REF/REF


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