Cherry SNP DataBase

SNP information

Name Pav_sc0000480.1_344788R
Chr PAV_r1.0chr6
Pos (Chr) 7340609
PAV_r1.0 Pav_sc0000480.1
Pos (PAV_r1.0) 344788
REF G
ALT A
SSR motif
Gene Name Pav_sc0000480.1_g540.1.mk
Annotation PREDICTED: transcription termination factor 1-like isoform X1
snpEff Effect 3_prime_UTR_variant
Impact MODIFIER
Codon c.*162C>T
Amino Acid
PCR Forward primer GGATTGGTTCTGGTGCCTAA
Reverse primer GAAGAAGTAAGACGTGCCGC
Product size 302
Enzymes for CAPS HaeIII
Exp. fragment size (REF) 149,153
Exp. fragment size (ALT) 302
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
REF/REF REF/REF REF/REF REF/REF REF/REF REF/ALT REF/REF


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