Cherry SNP DataBase

SNP information

Name Pav_sc0000481.1_25119Y
Chr PAV_r1.0chr4
Pos (Chr) 5621648
PAV_r1.0 Pav_sc0000481.1
Pos (PAV_r1.0) 25119
REF T
ALT C
SSR motif
Gene Name Pav_sc0000481.1_g040.1.mk
Annotation PREDICTED: 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal
snpEff Effect missense_variant
Impact MODERATE
Codon c.82A>G
Amino Acid p.Thr28Ala
PCR Forward primer TGTTGAAGGCAGCAATTGAG
Reverse primer CATTCTGCTCTGCTGTGAGC
Product size 310
Enzymes for CAPS
Exp. fragment size (REF)
Exp. fragment size (ALT)
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
REF/ALT REF/REF REF/ALT REF/ALT REF/ALT REF/ALT REF/ALT


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