Cherry SNP DataBase

SNP information

Name Pav_sc0000481.1_259841R
Chr PAV_r1.0chr4
Pos (Chr) 5386926
PAV_r1.0 Pav_sc0000481.1
Pos (PAV_r1.0) 259841
REF A
ALT G
SSR motif
Gene Name Pav_sc0000481.1_g330.1.mk
Annotation PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog
snpEff Effect missense_variant
Impact MODERATE
Codon c.235T>C
Amino Acid p.Ser79Pro
PCR Forward primer TAGGGCTTCTGATTTGGGAA
Reverse primer CCCACAAAACCCAATACCAC
Product size 221
Enzymes for CAPS
Exp. fragment size (REF)
Exp. fragment size (ALT)
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
REF/ALT REF/REF REF/REF REF/ALT REF/REF REF/REF REF/REF


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