Cherry SNP DataBase

SNP information

Name Pav_sc0000484.1_212942W
Chr PAV_r1.0chr3
Pos (Chr) 19274766
PAV_r1.0 Pav_sc0000484.1
Pos (PAV_r1.0) 212942
REF A
ALT T
SSR motif
Gene Name Pav_sc0000484.1_g490.1.mk
Annotation PREDICTED: transmembrane emp24 domain-containing protein p24delta9
snpEff Effect 3_prime_UTR_variant
Impact MODIFIER
Codon c.*534T>A
Amino Acid
PCR Forward primer TTTCTTGGCTCGCTCTTGTT
Reverse primer TGTTCCACCGAGAGGTTAGC
Product size 346
Enzymes for CAPS BglII | MboI
Exp. fragment size (REF) 265,81 | 91,174,81
Exp. fragment size (ALT) 346 | 91,255
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
REF/REF REF/REF REF/REF REF/REF REF/REF REF/ALT REF/REF


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