Cherry SNP DataBase

SNP information

Name Pav_sc0000581.1_8439M
Chr PAV_r1.0chr6
Pos (Chr) 16243049
PAV_r1.0 Pav_sc0000581.1
Pos (PAV_r1.0) 8439
REF A
ALT C
SSR motif
Gene Name Pav_sc0000581.1_g010.1.mk
Annotation PREDICTED: histidine--tRNA ligase, cytoplasmic-like isoform X2
snpEff Effect 3_prime_UTR_variant
Impact MODIFIER
Codon c.*924A>C
Amino Acid
PCR Forward primer TATTGCCAAGTTCCCCAGAG
Reverse primer GTTCCACCATGCGAATTTCT
Product size 239
Enzymes for CAPS
Exp. fragment size (REF)
Exp. fragment size (ALT)
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
REF/REF REF/ALT REF/ALT REF/ALT REF/ALT REF/REF REF/ALT


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