Cherry SNP DataBase

SNP information

Name Pav_sc0000584.1_382078M
Chr PAV_r1.0chr4
Pos (Chr) 11933474
PAV_r1.0 Pav_sc0000584.1
Pos (PAV_r1.0) 382078
REF A
ALT C
SSR motif
Gene Name Pav_sc0000584.1_g720.1.mk
Annotation PREDICTED: seipin-like
snpEff Effect missense_variant
Impact MODERATE
Codon c.178T>G
Amino Acid p.Ser60Ala
PCR Forward primer TTCAGGCATGGTCAATGAAA
Reverse primer AGGTTTGGCCTTCTTCAGGT
Product size 266
Enzymes for CAPS AluI
Exp. fragment size (REF) 27,239
Exp. fragment size (ALT) 27,71,168
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
REF/REF REF/REF REF/REF REF/REF REF/ALT REF/REF REF/REF


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