Cherry SNP DataBase

SNP information

Name Pav_sc0000666.1_15486W
Chr PAV_r1.0chr6
Pos (Chr) 15461583
PAV_r1.0 Pav_sc0000666.1
Pos (PAV_r1.0) 15486
REF A
ALT T
SSR motif
Gene Name Pav_sc0000666.1_g040.1.mk
Annotation PREDICTED: peptidyl-prolyl cis-trans isomerase-like 2
snpEff Effect synonymous_variant
Impact LOW
Codon c.762A>T
Amino Acid p.Ala254Ala
PCR Forward primer CTGCTTCTGCTTCAGTGCAT
Reverse primer CAGGATCAAAGGCGGTAGAA
Product size 347
Enzymes for CAPS AluI
Exp. fragment size (REF) 69,278
Exp. fragment size (ALT) 69,9,269
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
REF/REF REF/ALT REF/ALT REF/ALT REF/ALT REF/REF REF/ALT


| Top |