Cherry SNP DataBase

SNP information

Name Pav_sc0000691.1_119693Y
Chr PAV_r1.0chr1
Pos (Chr) 37136312
PAV_r1.0 Pav_sc0000691.1
Pos (PAV_r1.0) 119693
REF T
ALT C
SSR motif
Gene Name Pav_sc0000691.1_g200.1.mk
Annotation PREDICTED: TPR repeat-containing thioredoxin TTL1
snpEff Effect intron_variant
Impact MODIFIER
Codon c.377-56A>G
Amino Acid
PCR Forward primer GTTCCCCAACTGTCCTGAAA
Reverse primer AAGCCAAATCAAGGTGTTGC
Product size 238
Enzymes for CAPS HaeIII
Exp. fragment size (REF) 238
Exp. fragment size (ALT) 68,170
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
-/- REF/REF REF/REF REF/REF ALT/ALT REF/ALT REF/ALT


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