Cherry SNP DataBase

SNP information

Name Pav_sc0000759.1_260278Y
Chr PAV_r1.0chr3
Pos (Chr) 3814645
PAV_r1.0 Pav_sc0000759.1
Pos (PAV_r1.0) 260278
REF T
ALT C
SSR motif
Gene Name Pav_sc0000759.1_g440.1.mk
Annotation PREDICTED: ATP-dependent zinc metalloprotease FtsH
snpEff Effect synonymous_variant
Impact LOW
Codon c.2271T>C
Amino Acid p.Ala757Ala
PCR Forward primer GGATTTGAGGAAGCTTTTGC
Reverse primer ATTGAGTCGATCTGCAACCC
Product size 319
Enzymes for CAPS HaeIII
Exp. fragment size (REF) 264,55
Exp. fragment size (ALT) 212,52,55
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
REF/ALT REF/REF REF/REF REF/ALT REF/ALT ALT/ALT REF/REF


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