Cherry SNP DataBase

SNP information

Name Pav_sc0000791.1_96299R
Chr PAV_r1.0chr4
Pos (Chr) 11483100
PAV_r1.0 Pav_sc0000791.1
Pos (PAV_r1.0) 96299
REF A
ALT G
SSR motif
Gene Name Pav_sc0000791.1_g180.1.mk
Annotation PREDICTED: protein PAT1 homolog 1
snpEff Effect synonymous_variant
Impact LOW
Codon c.1437A>G
Amino Acid p.Ala479Ala
PCR Forward primer TTGCAAGGGTTGTTTCATCA
Reverse primer AACAGGCACATTTGGAGAGG
Product size 335
Enzymes for CAPS HhaI
Exp. fragment size (REF) 335
Exp. fragment size (ALT) 221,114
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
REF/ALT REF/REF REF/REF REF/ALT REF/REF REF/REF REF/REF


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