Cherry SNP DataBase

SNP information

Name Pav_sc0000800.1_642559Y
Chr PAV_r1.0chr1
Pos (Chr) 33207223
PAV_r1.0 Pav_sc0000800.1
Pos (PAV_r1.0) 642559
REF T
ALT C
SSR motif
Gene Name Pav_sc0000800.1_g1090.1.mk
Annotation PREDICTED: branched-chain-amino-acid aminotransferase-like protein 3, chloroplastic
snpEff Effect 3_prime_UTR_variant
Impact MODIFIER
Codon c.*292A>G
Amino Acid
PCR Forward primer TTTTCGATGCTTTATCGGCT
Reverse primer TGTCGTCCGGTTGTACTTTG
Product size 329
Enzymes for CAPS
Exp. fragment size (REF)
Exp. fragment size (ALT)
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
REF/ALT REF/ALT REF/REF REF/ALT ALT/ALT ALT/ALT REF/ALT


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