Cherry SNP DataBase

SNP information

Name Pav_sc0000813.1_54526Y
Chr PAV_r1.0chr7
Pos (Chr) 14408273
PAV_r1.0 Pav_sc0000813.1
Pos (PAV_r1.0) 54526
REF C
ALT T
SSR motif
Gene Name Pav_sc0000813.1_g080.1.mk
Annotation PREDICTED: aconitate hydratase 1
snpEff Effect intron_variant
Impact MODIFIER
Codon c.1708-55C>T
Amino Acid
PCR Forward primer GCCTATGCTCTTGCTGGAAC
Reverse primer TACCATCTTTTCCCAACCCA
Product size 245
Enzymes for CAPS HhaI
Exp. fragment size (REF) 143,102
Exp. fragment size (ALT) 245
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
REF/ALT ALT/ALT REF/ALT REF/REF ALT/ALT REF/ALT REF/ALT


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