Cherry SNP DataBase

SNP information

Name Pav_sc0000852.1_378635Y
Chr PAV_r1.0chr1
Pos (Chr) 32080047
PAV_r1.0 Pav_sc0000852.1
Pos (PAV_r1.0) 378635
REF T
ALT C
SSR motif
Gene Name Pav_sc0000852.1_g600.1.mk
Annotation PREDICTED: E3 ubiquitin-protein ligase arkadia-like isoform X1
snpEff Effect synonymous_variant
Impact LOW
Codon c.168T>C
Amino Acid p.Val56Val
PCR Forward primer GGGCAGAGGGGTACTATTGG
Reverse primer CATCCAAGTTCTGGTTTCCG
Product size 284
Enzymes for CAPS
Exp. fragment size (REF)
Exp. fragment size (ALT)
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
REF/REF REF/ALT REF/REF REF/REF ALT/ALT REF/REF REF/ALT


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