Cherry SNP DataBase

SNP information

Name Pav_sc0000852.1_541699R
Chr PAV_r1.0chr1
Pos (Chr) 32243111
PAV_r1.0 Pav_sc0000852.1
Pos (PAV_r1.0) 541699
REF A
ALT G
SSR motif
Gene Name Pav_sc0000852.1_g910.1.mk
Annotation PREDICTED: thioredoxin-like 4, chloroplastic
snpEff Effect synonymous_variant
Impact LOW
Codon c.288T>C
Amino Acid p.Ala96Ala
PCR Forward primer CAGCTCCCTTGCACAACTTT
Reverse primer CCTCAATTCCTGGGAGAACA
Product size 285
Enzymes for CAPS HaeIII
Exp. fragment size (REF) 240,45
Exp. fragment size (ALT) 102,138,45
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
REF/ALT REF/ALT REF/ALT ALT/ALT REF/REF REF/ALT REF/ALT


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