Cherry SNP DataBase

SNP information

Name Pav_sc0001077.1_56062M
Chr PAV_r1.0chr3
Pos (Chr) 15820401
PAV_r1.0 Pav_sc0001077.1
Pos (PAV_r1.0) 56062
REF C
ALT A
SSR motif
Gene Name Pav_sc0001077.1_g070.1.br
Annotation PREDICTED: tripartite motif-containing protein 44-like
snpEff Effect synonymous_variant
Impact LOW
Codon c.60G>T
Amino Acid p.Pro20Pro
PCR Forward primer TCGGGTTCATGATAGGGTTC
Reverse primer TGGTGACCACATTGACTTTCA
Product size 220
Enzymes for CAPS MspI
Exp. fragment size (REF) 92,128
Exp. fragment size (ALT) 220
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
ALT/ALT REF/ALT REF/ALT REF/ALT REF/ALT REF/ALT REF/ALT


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