Cherry SNP DataBase

SNP information

Name Pav_sc0001090.1_73067W
Chr PAV_r1.0chr8
Pos (Chr) 13195550
PAV_r1.0 Pav_sc0001090.1
Pos (PAV_r1.0) 73067
REF A
ALT T
SSR motif
Gene Name Pav_sc0001090.1_g180.1.mk
Annotation PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-processing protein 40A-like
snpEff Effect missense_variant
Impact MODERATE
Codon c.469A>T
Amino Acid p.Ser157Cys
PCR Forward primer ACTTTGCATCTGAATTGCCC
Reverse primer GGTGTAACTTGTCCCTCCGA
Product size 292
Enzymes for CAPS
Exp. fragment size (REF)
Exp. fragment size (ALT)
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
REF/ALT REF/ALT REF/ALT REF/ALT REF/ALT ALT/ALT REF/ALT


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