Cherry SNP DataBase

SNP information

Name Pav_sc0001196.1_261831Y
Chr PAV_r1.0chr1
Pos (Chr) 39622961
PAV_r1.0 Pav_sc0001196.1
Pos (PAV_r1.0) 261831
REF C
ALT T
SSR motif
Gene Name Pav_sc0001196.1_g400.1.mk
Annotation PREDICTED: alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial-like
snpEff Effect synonymous_variant
Impact LOW
Codon c.438C>T
Amino Acid p.His146His
PCR Forward primer CCATTGCCATCCAGAAGTTT
Reverse primer AACATTTCAAAGGGAAGGCT
Product size 272
Enzymes for CAPS
Exp. fragment size (REF)
Exp. fragment size (ALT)
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
REF/ALT REF/ALT REF/REF REF/ALT REF/ALT REF/ALT REF/REF


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