Cherry SNP DataBase

SNP information

Name Pav_sc0001196.1_262195K
Chr PAV_r1.0chr1
Pos (Chr) 39622597
PAV_r1.0 Pav_sc0001196.1
Pos (PAV_r1.0) 262195
REF G
ALT T
SSR motif
Gene Name Pav_sc0001196.1_g400.1.mk
Annotation PREDICTED: alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial-like
snpEff Effect intron_variant
Impact MODIFIER
Codon c.496-11G>T
Amino Acid
PCR Forward primer TCTGGGACTGTTGTGTAATCCA
Reverse primer TGTGTTCAAAGCGGTCAAAC
Product size 241
Enzymes for CAPS DraI
Exp. fragment size (REF) 241
Exp. fragment size (ALT) 82,159
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
REF/ALT REF/REF REF/REF REF/ALT REF/REF REF/REF REF/ALT


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