Cherry SNP DataBase

SNP information

Name Pav_sc0001196.1_376011R
Chr PAV_r1.0chr1
Pos (Chr) 39508781
PAV_r1.0 Pav_sc0001196.1
Pos (PAV_r1.0) 376011
REF A
ALT G
SSR motif
Gene Name Pav_sc0001196.1_g600.1.mk
Annotation PREDICTED: LOW QUALITY PROTEIN: conserved oligomeric Golgi complex subunit 1
snpEff Effect synonymous_variant
Impact LOW
Codon c.3027T>C
Amino Acid p.Pro1009Pro
PCR Forward primer TGCTTGGTGAGACTCCACTG
Reverse primer TGCTAACAGATGGGCAAGTG
Product size 221
Enzymes for CAPS
Exp. fragment size (REF)
Exp. fragment size (ALT)
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
REF/ALT REF/REF REF/REF REF/REF REF/REF REF/REF REF/REF


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