Cherry SNP DataBase

SNP information

Name Pav_sc0001196.1_629013M
Chr PAV_r1.0chr1
Pos (Chr) 39255779
PAV_r1.0 Pav_sc0001196.1
Pos (PAV_r1.0) 629013
REF C
ALT A
SSR motif
Gene Name Pav_sc0001196.1_g960.1.mk
Annotation PREDICTED: uncharacterized protein LOC103319019 isoform X1
snpEff Effect synonymous_variant
Impact LOW
Codon c.477G>T
Amino Acid p.Ala159Ala
PCR Forward primer CCCGACTTAGACAAAGCAGC
Reverse primer CCGGGAACTCTTATGGGAAT
Product size 215
Enzymes for CAPS HhaI
Exp. fragment size (REF) 112,103
Exp. fragment size (ALT) 215
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
ALT/ALT REF/REF REF/REF REF/ALT REF/REF REF/ALT REF/REF


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