Cherry SNP DataBase

SNP information

Name Pav_sc0001258.1_137024W
Chr PAV_r1.0chr1
Pos (Chr) 34178219
PAV_r1.0 Pav_sc0001258.1
Pos (PAV_r1.0) 137024
REF T
ALT A
SSR motif
Gene Name Pav_sc0001258.1_g270.1.mk
Annotation PREDICTED: psbP domain-containing protein 5, chloroplastic isoform X1
snpEff Effect synonymous_variant
Impact LOW
Codon c.258T>A
Amino Acid p.Ile86Ile
PCR Forward primer AAGTGCAAATGCCCCTTTAG
Reverse primer TTTTCAAGATCCTCCGGTTG
Product size 342
Enzymes for CAPS
Exp. fragment size (REF)
Exp. fragment size (ALT)
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
REF/ALT REF/ALT REF/REF REF/REF REF/REF REF/ALT REF/REF


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