Cherry SNP DataBase

SNP information

Name Pav_sc0001258.1_37301Y
Chr PAV_r1.0chr1
Pos (Chr) 34277942
PAV_r1.0 Pav_sc0001258.1
Pos (PAV_r1.0) 37301
REF C
ALT T
SSR motif
Gene Name Pav_sc0001258.1_g060.1.mk
Annotation PREDICTED: probable 2-oxoglutarate-dependent dioxygenase AOP1
snpEff Effect synonymous_variant
Impact LOW
Codon c.450C>T
Amino Acid p.Tyr150Tyr
PCR Forward primer CACAGAGCTGATGTGGCCTA
Reverse primer AGATGGAGGTGCGCTGTACT
Product size 300
Enzymes for CAPS
Exp. fragment size (REF)
Exp. fragment size (ALT)
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
REF/ALT REF/ALT REF/REF REF/REF REF/REF REF/ALT REF/REF


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