Cherry SNP DataBase

SNP information

Name Pav_sc0001369.1_197740M
Chr PAV_r1.0chr3
Pos (Chr) 6370286
PAV_r1.0 Pav_sc0001369.1
Pos (PAV_r1.0) 197740
REF C
ALT A
SSR motif
Gene Name Pav_sc0001369.1_g450.1.mk
Annotation PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At3g15930
snpEff Effect intron_variant
Impact MODIFIER
Codon c.2189+693G>T
Amino Acid
PCR Forward primer CCTTTGCCATGCAAATAGGT
Reverse primer AGGATTTAATACAGTGGCATGTG
Product size 346
Enzymes for CAPS MboI
Exp. fragment size (REF) 156,190
Exp. fragment size (ALT) 346
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
REF/ALT REF/REF REF/REF -/- REF/REF REF/REF REF/REF


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