Cherry SNP DataBase

SNP information

Name Pav_sc0001369.1_197764W
Chr PAV_r1.0chr3
Pos (Chr) 6370262
PAV_r1.0 Pav_sc0001369.1
Pos (PAV_r1.0) 197764
REF T
ALT A
SSR motif
Gene Name Pav_sc0001369.1_g450.1.mk
Annotation PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At3g15930
snpEff Effect intron_variant
Impact MODIFIER
Codon c.2189+669A>T
Amino Acid
PCR Forward primer CCTTTGCCATGCAAATAGGT
Reverse primer AGGATTTAATACAGTGGCATGTG
Product size 346
Enzymes for CAPS
Exp. fragment size (REF)
Exp. fragment size (ALT)
References
Germplasm List
Benikirari Benisayaka Benishuho Benitemari Beniyutaka Nanyo Satonishiki
REF/REF REF/ALT REF/REF REF/REF REF/REF REF/REF REF/REF


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